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Directories | |
| allocators | |
| columns | |
Files | |
| base_matrix.h | |
| Contains the Base_matrix class. | |
| base_matrix_with_column_compression.h | |
| Contains the Base_matrix_with_column_compression class. | |
| base_pairing.h | |
| Contains the Base_pairing class and Dummy_base_pairing structure. | |
| base_swap.h | |
| Contains the Base_swap class and Dummy_base_swap structure. | |
| boundary_matrix.h | |
| Contains the Boundary_matrix class. | |
| chain_matrix.h | |
| Contains the Chain_matrix class. | |
| chain_pairing.h | |
| Contains the Chain_pairing class and Dummy_chain_pairing structure. | |
| chain_rep_cycles.h | |
| Contains the Chain_representative_cycles class and Dummy_chain_representative_cycles structure. | |
| chain_vine_swap.h | |
| Contains the Chain_barcode_swap and Chain_vine_swap classes, as well as the Dummy_chain_vine_swap and Dummy_chain_vine_pairing structures. | |
| matrix_dimension_holders.h | |
| Contains the Matrix_max_dimension_holder Matrix_all_dimension_holder classes and the Dummy_matrix_dimension_holder structure. | |
| matrix_row_access.h | |
| Contains the Matrix_row_access class and Dummy_matrix_row_access structure. | |
| overlay_ididx_to_matidx.h | |
| Contains the Id_to_index_overlay class. | |
| overlay_posidx_to_matidx.h | |
| Contains the Position_to_index_overlay class. | |
| ru_matrix.h | |
| Contains the RU_matrix class. | |
| ru_pairing.h | |
| Contains the RU_pairing class and Dummy_ru_pairing structure. | |
| ru_rep_cycles.h | |
| Contains the RU_representative_cycles class and Dummy_ru_representative_cycles structure. | |
| ru_vine_swap.h | |
| Contains the RU_vine_swap class, as well as the Dummy_ru_vine_swap and Dummy_ru_vine_pairing structures. | |